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propose-designs

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Plan next-gen protein designs.

Software Engineering#bioinformatics#design optimization#protein design#boltzgen#strategy analysis#rf-diffusion
Authoralex-hh
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill helps you analyze the results of previous protein design rounds and make data-driven decisions for planning the next iteration, optimizing strategies, and improving design outcomes.

Core Features & Use Cases

  • Analyze Design Metrics: Evaluate performance across different strategies and tools (BoltzGen vs. RFdiffusion3).
  • Propose Adjustments: Suggest specific changes to hotspots, binder lengths, and generation parameters.
  • Plan Next Round: Define concrete steps, configurations, and expected improvements for future design campaigns.
  • Use Case: After running a design round for a protein target, use this Skill to review which strategies yielded the best binders, identify which parameters led to successful designs, and get a clear plan for the next round, including specific configuration changes.

Quick Start

Analyze the results from the latest design round and propose a plan for the next round.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: propose-designs
Download link: https://github.com/alex-hh/in-silico-pgdh/archive/main.zip#propose-designs

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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