phylogenetics
CommunityUncover evolutionary history with precision.
Education & Research#bioinformatics#phylogenetics#evolutionary analysis#sequence alignment#tree inference#iqtree#mafft
AuthorYezez9
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates the complex process of reconstructing evolutionary relationships between biological sequences, enabling deep insights into evolution, disease spread, and molecular function.
Core Features & Use Cases
- Sequence Alignment: Precisely aligns DNA, RNA, or protein sequences using MAFFT.
- Phylogenetic Tree Inference: Builds evolutionary trees using robust methods like IQ-TREE 2 (Maximum Likelihood) or FastTree (fast approximation).
- Visualization: Generates clear, interpretable tree visualizations.
- Use Case: Trace the evolutionary path of a viral outbreak to understand its origins and spread, or analyze gene family evolution to discover functional relationships.
Quick Start
Run a full phylogenetic analysis on the provided DNA sequences in 'sequences.fasta'.
Dependency Matrix
Required Modules
None requiredComponents
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: phylogenetics Download link: https://github.com/Yezez9/Research-Agent/archive/main.zip#phylogenetics Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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