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nextflow-pipeline-overview

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Understand unfamiliar Nextflow pipelines quickly.

Data & Analytics#config#pipeline#overview#nf-core#nextflow
Authoredmundmiller
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill helps you quickly understand an unfamiliar Nextflow pipeline without reading every file, building a mental model of structure and components.

Core Features & Use Cases

  • High-level overview: Get structure, workflows, and key parameters.
  • Tree view: Visualize modules, subworkflows, and processes.
  • Params extraction: Retrieve nextflow.config params and schemas when available.
  • Component count: Quick gauge of processes, workflows, mod ules (local vs nf-core).

Quick Start

Run the overview tool on your pipeline directory to get a summary, then drill into the tree for details.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

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Please help me install this Skill:
Name: nextflow-pipeline-overview
Download link: https://github.com/edmundmiller/dotfiles/archive/main.zip#nextflow-pipeline-overview

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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