igv-integration
CommunityAutomate IGV snapshots for multi-BAM regions.
Authordakesan
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates visualization workflows by generating IGV snapshots for genomic regions with multiple BAM tracks, aiding quality control and comparative analyses.
Core Features & Use Cases
- Batch IGV Snapshots: Generate region-based PNGs across multiple BAMs.
- BED Region Support: Process multiple regions from BED files for batch visualization.
- Configurable Output: Customize IGV batch settings and output directories.
Quick Start
Create IGV snapshots for chr1:1000-2000 using three BAMs and save to an output directory.
Dependency Matrix
Required Modules
typer
Components
scripts
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: igv-integration Download link: https://github.com/dakesan/cc-dnawork-plugin/archive/main.zip#igv-integration Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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