bio-instrument-data
OfficialStandardize lab instrument data
Education & Research#bioinformatics#data conversion#LIMS#data standardization#allotrope#instrument data
Authorfrumu-ai
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill standardizes diverse laboratory instrument output files into a unified, machine-readable format, streamlining data integration and analysis.
Core Features & Use Cases
- Data Conversion: Converts PDF, CSV, Excel, and TXT instrument files to Allotrope Simple Model (ASM) JSON or flattened 2D CSV.
- Auto-Detection: Automatically identifies instrument types for accurate parsing.
- Multiple Outputs: Generates full ASM JSON, flattened CSV, and exportable Python parser code.
- Use Case: Scientists can use this skill to prepare instrument data for LIMS systems, data lakes, or downstream analysis pipelines, ensuring data consistency and interoperability.
Quick Start
Use the bio-instrument-data skill to convert the file 'my_instrument_data.csv' into ASM JSON format.
Dependency Matrix
Required Modules
pythonbash
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-instrument-data Download link: https://github.com/frumu-ai/tandem/archive/main.zip#bio-instrument-data Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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