bio-data-visualization-specialized-omics-plots

What problem does it solve?

This Skill provides a comprehensive suite of tools for visualizing complex RNA-seq and omics data, enabling deeper biological insights and publication-quality figures.

Core Features & Use Cases

• Differential Expression Visualization: Generate MA plots, volcano plots, and dispersion plots to understand gene expression changes.
• Dimensionality Reduction: Create PCA plots and heatmaps to explore sample relationships and identify patterns.
• Enrichment Analysis Visualization: Visualize enrichment results using dotplots.
• Use Case: After performing differential expression analysis on RNA-seq data, use this Skill to create a volcano plot showing significant genes and a heatmap of their expression patterns across samples.

Quick Start

Generate a volcano plot for my differential expression results, highlighting genes with an adjusted p-value below 0.05 and a log2 fold change greater than 1.