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valency-anndata

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AnnData-based Polis analytics toolkit.

Data & Analytics#visualization#preprocessing#clustering#datasets#anndata#polis#recipe_polis
Authorpatcon
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Polis data analysis and visualization with AnnData is complex and fragmented; this skill provides an integrated toolkit to work with Polis conversations, run the Polis pipeline, load datasets, preprocess vote matrices, cluster participants, and visualize results.

Core Features & Use Cases

  • End-to-end workflow for Polis data using AnnData, including loading votes, running recipe_polis, calculating QC metrics, and generating embeddings.
  • Supports multiple projection embeddings (PaCMAP, LocalMAP, UMAP, or t-SNE) with per-embedding clustering and perspective plots.
  • Example: Load a Polis conversation, run the pipeline, and compare embeddings with different projection bases.

Quick Start

Invoke the skill and follow prompts to select projection maps after running recipe_polis.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: valency-anndata
Download link: https://github.com/patcon/valency-anndata/archive/main.zip#valency-anndata

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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