uniprot-protein-database
CommunityAccess and query UniProt protein data.
Education & Research#bioinformatics#protein database#sequence retrieval#proteomics#uniprot#id mapping
Authorjaechang-hits
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides programmatic access to the UniProt protein database, enabling users to search for proteins, retrieve sequences, and map identifiers across different databases without manual web browsing.
Core Features & Use Cases
- Protein Search: Find proteins using gene names, accession numbers, or functional keywords.
- Sequence Retrieval: Download protein sequences in FASTA format.
- ID Mapping: Convert identifiers between UniProt, Ensembl, PDB, and RefSeq.
- Annotation Access: Retrieve functional annotations, GO terms, and protein features.
- Use Case: Quickly find all human BRCA1 protein sequences and their corresponding PDB IDs for structural analysis.
Quick Start
Search for human insulin proteins using the UniProt REST API and print the first 500 characters of the results.
Dependency Matrix
Required Modules
requestspandas
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: uniprot-protein-database Download link: https://github.com/jaechang-hits/SciAgent-Skills/archive/main.zip#uniprot-protein-database Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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