Skills
.Work. You
Rest

tree-visualization

Community

Publish-ready phylogenetic tree visualizations.

Design & Creative#visualization#matplotlib#R#publication#phylogenetic trees#ggtree
Authorroeimed0
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This skill helps researchers create publication-quality phylogenetic tree visualizations in Python and R, enabling clear communication of results and publications.

Core Features & Use Cases

  • Python Matplotlib layouts (rectangular, circular, radial) with bootstrap annotations and clade coloring.
  • R ggTree integration for publication-grade aesthetics and annotation capabilities, including export to PDF/SVG.
  • Use cases: generating figures for manuscripts, presentations, and digital repositories; interactive visualizations in notebooks.

Quick Start

Install and run templates to generate basic visualizations from your tree data. For example, start with a simple Newick tree and produce rectangular and circular layouts, then export to PDF or SVG.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: tree-visualization
Download link: https://github.com/roeimed0/rrna-phylo/archive/main.zip#tree-visualization

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
View Source Repository

Agent Skills Search Helper

Install a tiny helper to your Agent, search and equip skill from 223,000+ vetted skills library on demand.