tooluniverse-rare-disease-diagnosis

Official

Diagnose rare diseases from phenotype and genes.

Authormims-harvard
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill streamlines rare disease diagnosis by translating patient phenotypes into standardized HPO terms, integrating genetic data, and generating structured differential diagnoses.

Core Features & Use Cases

  • Phenotype to disease mapping: Converts patient features to HPO terms and matches them to Orphanet/OMIM diseases.
  • Gene panel prioritization: Identifies high-priority genes for testing based on ClinGen, haploinsufficiency, and tissue expression.
  • Variant interpretation workflow: Provides a framework to interpret VUS with population data, pathogenicity predictions, and literature context.
  • Use Case: A child with developmental delay and epilepsy receives a ranked differential with recommended genetic tests and a plan for follow-up.

Quick Start

Enter patient phenotype and optional genetic data to generate a prioritized differential and testing plan. The tool will convert symptoms to HPO terms, match diseases from Orphanet and OMIM, and propose a gene panel and variant interpretation workflow.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: tooluniverse-rare-disease-diagnosis
Download link: https://github.com/mims-harvard/ToolUniverse/archive/main.zip#tooluniverse-rare-disease-diagnosis

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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