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seuratclusterstats

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Comprehensive Seurat cluster stats and visuals.

Data & Analytics#visualization#statistics#single-cell#cluster#seurat#scrna-seq#clustree
Authorpwwang
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Generates comprehensive cluster statistics and visualizations for Seurat objects to facilitate evaluation of clustering results and interpretation of cluster relationships.

Core Features & Use Cases

  • Produces dimension reduction plots, cluster quality metrics, and gene expression visualizations.
  • Creates clustree diagrams to illustrate cluster relationships and stability.
  • Supports SeuratClustering and SeuratSubClustering workflows and outputs plots for QC and reporting.

Quick Start

Run SeuratClusterStats on your Seurat object to generate the standard set of cluster statistics and visualizations.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: seuratclusterstats
Download link: https://github.com/pwwang/immunopipe/archive/main.zip#seuratclusterstats

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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