sampleinfo

Community

Orchestrate sample metadata analysis and reports.

Authorpwwang
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Reads and processes sample metadata files, performs statistical analyses, and generates visualization reports to support downstream analyses in single-cell workflows.

Core Features & Use Cases

  • Ingests CSV/TSV sample metadata with required columns like Sample and RNAData.
  • Applies optional mutations, defaults, and plotting configurations to tailor reports.
  • Produces statistical summaries and visualizations to streamline planning and QC.

Quick Start

Provide the path to your sample_info.csv and run the SampleInfo process to produce the initial statistics and reports.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: sampleinfo
Download link: https://github.com/pwwang/immunopipe/archive/main.zip#sampleinfo

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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