research-pipeline

Automate research workflows from idea discovery to submission-ready papers.

2|Updated Mar 29, 2026
One-click install
npx skills add https://github.com/satsuki-64/MiniAgentWorkflow --skill research-pipeline-satsuki-64
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: research-pipeline
Source: https://github.com/satsuki-64/MiniAgentWorkflow/tree/main/.skills/research-pipeline
Command: npx skills add https://github.com/satsuki-64/MiniAgentWorkflow --skill research-pipeline-satsuki-64

SYSTEM DOCUMENTATION & REQUIREMENTS

What problem does it solve?

Automates the end-to-end research lifecycle, transforming scattered ideas into a structured, submission-ready paper.

Core Features & Use Cases

  • End-to-end orchestration: from idea discovery through experiments to final submission.
  • Configurable automation gates: AUTO_PROCEED, ARXIV_DOWNLOAD, and HUMAN_CHECKPOINT enable autonomous or human-in-the-loop workflows.
  • Tracking and artifacts: outputs include IDEA_REPORT.md, implementation notes, and final reports for reproducibility.

Quick Start

Initiate the full research pipeline by providing a research direction and let the system orchestrate stages from idea discovery through submission.

Frequently Asked Questions about research-pipeline

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I automate the research pipeline from idea discovery to paper submission?▼

An automated research pipeline orchestrates end-to-end workflows from idea generation to submission-ready papers. It handles literature review, experiment design, and paper drafting, with optional human checkpoints for review.

Can I configure the research pipeline to run autonomously without human intervention?▼

Yes, the pipeline supports autonomous workflows through configurable automation gates like AUTO_PROCEED and ARXIV_DOWNLOAD. These settings enable the system to run stages continuously without requiring manual approval at each step.

Does the automated research pipeline support fetching literature from arXiv?▼

Yes, the pipeline supports fetching literature from arXiv through configurable ARXIV_DOWNLOAD options. This feature integrates arXiv paper retrieval directly into the Stage 1 idea discovery and literature review workflow.

What stages are included in an end-to-end automated research pipeline?▼

The end-to-end research pipeline implements five stages: Stage 1 idea discovery, Stage 2 implementation, Stage 3 deployment, Stage 4 auto-review, and Stage 5 final reporting. Each stage outputs tracking artifacts for reproducibility.

What output files does the automated research pipeline generate for reproducibility?▼

The pipeline outputs IDEA_REPORT.md, implementation notes, and final reports as tracking artifacts. These files ensure reproducibility by documenting the entire research lifecycle from idea discovery through final submission.

What are the limitations of using a fully autonomous research pipeline for paper drafting?▼

A fully autonomous pipeline may lack domain-specific nuance during experiment design and paper drafting. Enabling HUMAN_CHECKPOINT at critical stages allows researchers to validate findings and review outputs before final submission.