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remote-compute

Official

Run code on remote KBase compute nodes.

Software Engineering#bioinformatics#data processing#batch processing#remote execution#cts#compute cluster
Authorkbaseincubator
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill allows users to execute computationally intensive or long-running scripts on dedicated remote KBase compute nodes, freeing up their local machine or notebook resources.

Core Features & Use Cases

  • Remote Script Execution: Run arbitrary bash scripts in a containerized Ubuntu environment on KBase infrastructure.
  • Resource Intensive Tasks: Ideal for bioinformatics tools, large-scale data processing, and jobs requiring significant CPU or memory.
  • Use Case: You have a complex genomic analysis script that takes several hours to run. Submit it using the remote-compute skill to execute on a powerful KBase node without interrupting your interactive analysis.

Quick Start

Use the remote-compute skill to run your analysis script 'my-analysis.sh' with input files 'genome1.fna.gz' and 'genome2.fna.gz'.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: remote-compute
Download link: https://github.com/kbaseincubator/BERIL-research-observatory/archive/main.zip#remote-compute

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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