Skills
.Work. You
Rest

query-geo

Community

Query GEO datasets quickly and accurately.

Data & Analytics#expression#microarray#datasets#geo#rnaseq#gse#gds
AuthorRunchuan-BU
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Researchers need to discover public gene expression datasets in GEO for RNA-seq and microarray studies, but manually searching and compiling metadata is time-consuming and error-prone.

Core Features & Use Cases

  • Search GEO by keywords, organism, and accession type (GSE/GDS) to discover relevant datasets.
  • Retrieve dataset summaries including title, accession, platform, sample count, and a concise description.
  • Explore Series (GSE) entries and view direct URLs for quick download or downstream analysis.
  • Use case: a researcher investigates a disease and wants public RNA-seq or microarray data for meta-analysis.

Quick Start

Ask me to search GEO for a keyword and I will return matching GSE/GDS entries with summaries.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: query-geo
Download link: https://github.com/Runchuan-BU/BioClaw/archive/main.zip#query-geo

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
View Source Repository

Agent Skills Search Helper

Install a tiny helper to your Agent, search and equip skill from 223,000+ vetted skills library on demand.