preprocess-debug

Community

Diagnose preprocessing failures

AuthorMarioPasc
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill helps users quickly identify and resolve issues within a complex medical image preprocessing pipeline, preventing data quality problems and saving significant debugging time.

Core Features & Use Cases

  • Step Failure Identification: Pinpoints the exact preprocessing step that caused a failure or produced poor results.
  • Artifact Analysis: Guides users on how to inspect intermediate files and visualizations generated by each step.
  • Specific Failure Patterns: Provides targeted advice for common issues in registration, skull stripping, intensity normalization, and more.
  • Use Case: When a preprocessing run for a new patient fails unexpectedly, use this Skill to systematically check logs, visualizations, and artifacts to determine if the registration step misaligned the images or if skull stripping removed essential brain tissue.

Quick Start

Use the preprocess-debug skill to investigate why the registration step failed for patient MenGrowth-XXXX.

Dependency Matrix

Required Modules

None required

Components

referencesscripts

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: preprocess-debug
Download link: https://github.com/MarioPasc/MenGrowth/archive/main.zip#preprocess-debug

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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