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pipeline-manifest

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Map scripts to inputs, outputs, and paper figures.

Education & Research#documentation#data flow#pipeline#scripting#reproducibility#research workflow
Authorflonat
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill helps you systematically document and visualize the data flow and dependencies within your research projects, ensuring reproducibility and clarity.

Core Features & Use Cases

  • Pipeline Mapping: Creates a pipeline.md file detailing script inputs, outputs, and dependencies.
  • Header Injection: Optionally adds structured headers to scripts lacking them, standardizing metadata.
  • Use Case: Before submitting a paper, use this Skill to generate a clear pipeline.md that shows exactly which scripts produce each figure and table, making your replication package transparent.

Quick Start

Run the pipeline-manifest skill to scan the current project and generate a pipeline.md file.

Dependency Matrix

Required Modules

None required

Components

scriptsreferences

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: pipeline-manifest
Download link: https://github.com/flonat/claude-code-flonat/archive/main.zip#pipeline-manifest

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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