phenotype-lab-spec
CommunityFrom EHR data, build validated phenotypes.
Data & Analytics#workflow#validation#clinical-research#phenotype-definition#ehr-data#lab-values#phenotyping
Authortito-gh
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill enables researchers and clinicians to translate complex phenotype and laboratory value criteria into machine-executable definitions, ensuring reproducibility and scalable validation across large EHR datasets.
Core Features & Use Cases
- Computer-executable phenotype definitions: Create structured, reusable definitions for Population, Exposure, Outcome, and Covariates that can be run against EHR data.
- Lab value mapping and time-series handling: Define lab variable mappings, normal ranges, and longitudinal processing to support robust analyses.
- Validation planning and templates: Provide built-in validation templates (PPV targets, sensitivity targets) and evaluation plans to ensure clinical relevance.
Quick Start
Create a phenotype definition for an NDMM exposure to daratumumab using IMWG criteria, and generate an accompanying validation plan.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: phenotype-lab-spec Download link: https://github.com/tito-gh/healthcare/archive/main.zip#phenotype-lab-spec Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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