phenotype-lab-spec

Community

From EHR data, build validated phenotypes.

Authortito-gh
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill enables researchers and clinicians to translate complex phenotype and laboratory value criteria into machine-executable definitions, ensuring reproducibility and scalable validation across large EHR datasets.

Core Features & Use Cases

  • Computer-executable phenotype definitions: Create structured, reusable definitions for Population, Exposure, Outcome, and Covariates that can be run against EHR data.
  • Lab value mapping and time-series handling: Define lab variable mappings, normal ranges, and longitudinal processing to support robust analyses.
  • Validation planning and templates: Provide built-in validation templates (PPV targets, sensitivity targets) and evaluation plans to ensure clinical relevance.

Quick Start

Create a phenotype definition for an NDMM exposure to daratumumab using IMWG criteria, and generate an accompanying validation plan.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: phenotype-lab-spec
Download link: https://github.com/tito-gh/healthcare/archive/main.zip#phenotype-lab-spec

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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