pgdh-design
CommunityOrchestrate PGDH binder design pipeline
Software Engineering#orchestration#pipeline automation#protein design#binder design#computational biology#15-PGDH
Authoralex-hh
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates the complex, multi-step process of designing and evaluating protein binders for the 15-PGDH target, ensuring all results are standardized and tracked.
Core Features & Use Cases
- End-to-End Orchestration: Manages the full pipeline from design generation (BoltzGen, RFdiffusion3) to validation (Boltz-2) and scoring (ipSAE).
- Standardized Output: Ensures all design outputs are consistently stored in a central "source of truth" directory on S3.
- Use Case: Initiate a complete binder design campaign for 15-PGDH, from initial sequence generation through to final scoring and ranking, with a single command.
Quick Start
Run the complete PGDH binder design, validation, and scoring pipeline.
Dependency Matrix
Required Modules
None requiredComponents
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: pgdh-design Download link: https://github.com/alex-hh/in-silico-pgdh/archive/main.zip#pgdh-design Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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