pegasus-review
OfficialReview Pegasus workflows for errors.
Authorpegasus-isi
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill automates the review of Pegasus workflows, identifying common pitfalls, errors, and areas for improvement to ensure robust and efficient execution.
Core Features & Use Cases
- Comprehensive Checklist: Evaluates workflows against categories like Transformation Catalog, Replica Catalog, DAG Correctness, File I/O, Wrapper Scripts, Resource Configuration, Dockerfile, and CLI usability.
- Error Detection: Pinpoints critical errors that will cause runtime failures.
- Best Practice Guidance: Offers warnings and suggestions for non-standard patterns and potential optimizations.
- Use Case: Before submitting a complex bioinformatics workflow to Pegasus, use this Skill to automatically check for common configuration errors, ensuring it runs smoothly and avoids costly debugging cycles.
Quick Start
Use the pegasus-review skill to review the workflow in the current directory.
Dependency Matrix
Required Modules
None requiredComponents
referencesscripts
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: pegasus-review Download link: https://github.com/pegasus-isi/pegasus-workflow-toolkit/archive/main.zip#pegasus-review Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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