orfverifier
CommunityVerify plasmid ORFs quickly and reliably.
Authorfarnunglab
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Verify that given amino acid sequences are present in plasmid DNA by performing six-frame translations and cross-checking against reference sequences, reducing manual verification effort in cloning projects.
Core Features & Use Cases
- Verify ORFs in plasmids using six-frame translation against provided amino acid sequences.
- Accept direct FASTA/GenBank input or NCBI accession for on-demand verification and annotation.
- JSON and summary outputs for integration with downstream pipelines and reporting.
Quick Start
Run the CLI with a plasmid file and an amino acid sequence to verify the ORF.
Dependency Matrix
Required Modules
None requiredComponents
scripts
💻 Claude Code Installation
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Please help me install this Skill: Name: orfverifier Download link: https://github.com/farnunglab/benchaid/archive/main.zip#orfverifier Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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