metabolicinput
CommunityPreps Seurat objects for metabolic analysis.
Authorpwwang
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Automates the transition from a prepared Seurat object to downstream metabolic analysis steps, eliminating manual routing and ensuring consistency across analyses.
Core Features & Use Cases
- Pass-through integration: takes the Seurat object from upstream steps and forwards to MetabolicExprImputation, MetabolicPathwayActivity, MetabolicFeatures, and MetabolicPathwayHeterogeneity.
- No direct configuration required: behavior is driven by the ScrnaMetabolicLandscape group level.
- Use Case: after Clustering, enable metabolic landscape analyses without reconfiguring objects.
Quick Start
Invoke the metabolicinput step after Seurat clustering to route the object to downstream metabolic analyses.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: metabolicinput Download link: https://github.com/pwwang/immunopipe/archive/main.zip#metabolicinput Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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