Skills
.Work. You
Rest

lifesciences-genomics

Community

Genomics gene lookup and variant annotation.

Education & Research#genomics#ncbi#ensembl#gene-lookup#orthology#variant-annotation
Authordonbr
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Automates reliable gene identifier resolution and variant annotation by querying Ensembl, NCBI, and HGNC, enabling reproducible cross-database results.

Core Features & Use Cases

  • LOCATE: locate genes by symbol or name and map to canonical IDs (HGNC, Ensembl, NCBI).
  • RETRIEVE: fetch full gene metadata, cross-references, and orthology relationships for validation.
  • Cross-database ID resolution and variant annotation (via Ensembl VEP) with curl fallback when MCP tools are unavailable.
  • Use cases include annotating variants, finding orthologs, mapping gene IDs, and performing LD analysis across species.

Quick Start

Locate HGNC/Ensembl IDs for a gene symbol and retrieve full gene metadata.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: lifesciences-genomics
Download link: https://github.com/donbr/lifesciences-deepagents/archive/main.zip#lifesciences-genomics

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
View Source Repository

Agent Skills Search Helper

Install a tiny helper to your Agent, search and equip skill from 223,000+ vetted skills library on demand.