lib-cobrapy
OfficialMetabolic modeling and analysis
Education & Research#bioinformatics#systems biology#cobrapy#metabolic modeling#flux balance analysis#constraint-based modeling
Authorbiomaps-infra
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill empowers users to analyze and simulate complex biological metabolic networks, enabling predictions about cellular behavior and guiding metabolic engineering efforts.
Core Features & Use Cases
- Model Loading & Management: Load, save, and manipulate metabolic models in various formats (SBML, JSON, YAML).
- Simulation & Analysis: Perform Flux Balance Analysis (FBA), Flux Variability Analysis (FVA), gene/reaction knockouts, and flux sampling.
- Use Case: A researcher can use this Skill to simulate the effect of deleting a specific gene on a bacterium's growth rate or to identify the optimal conditions for producing a valuable metabolite.
Quick Start
Use the lib-cobrapy skill to load the 'ecoli' model and predict its growth rate.
Dependency Matrix
Required Modules
None requiredComponents
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: lib-cobrapy Download link: https://github.com/biomaps-infra/blender-opencode/archive/main.zip#lib-cobrapy Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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