galaxy-workflow-development

Community

Master Galaxy workflows with IWC standards

AuthorDelphine-L
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill helps teams create, validate, and optimize Galaxy .ga workflows following Intergalactic Workflow Commission standards, reducing setup time and improving reproducibility.

Core Features & Use Cases

  • Create and structure Galaxy workflows (.ga)
  • Validate and lint workflows using Planemo with IWC guidelines
  • Test workflows with Planemo tests and generate metadata for Dockstore/WorkflowHub
  • Example: Build and test a RNA-seq analysis pipeline and ensure it passes all tests and documentation requirements.

Quick Start

Create a new workflow directory, add workflow-name.ga and workflow-name-tests.yml, then run planemo to lint and test.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: galaxy-workflow-development
Download link: https://github.com/Delphine-L/claude_global/archive/main.zip#galaxy-workflow-development

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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