flowio
CommunityParse and create Flow Cytometry files
AuthorRowtion
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill simplifies the complex task of reading, parsing, and creating Flow Cytometry Standard (FCS) files, which are essential for analyzing cell data.
Core Features & Use Cases
- FCS File Parsing: Read metadata, channel information, and event data from FCS files.
- Data Conversion: Extract event data into NumPy arrays for further analysis.
- FCS File Creation: Generate new FCS files from processed data.
- Use Case: You have a directory of FCS files from a recent experiment. Use this Skill to batch process them, extract key metadata like acquisition date and instrument, and convert the event data into a format suitable for downstream analysis in Python.
Quick Start
Use the flowio skill to read the file 'experiment.fcs' and print its event count.
Dependency Matrix
Required Modules
flowionumpypandas
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: flowio Download link: https://github.com/Rowtion/Bioclaw/archive/main.zip#flowio Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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