db-pdb
OfficialAccess protein structures from RCSB PDB.
Authorbiomaps-infra
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides access to the RCSB Protein Data Bank, enabling users to find, download, and analyze 3D structures of proteins and nucleic acids, crucial for structural biology and drug discovery.
Core Features & Use Cases
- Search Structures: Find PDB entries by text, sequence, or structural similarity.
- Download Data: Retrieve coordinate files (PDB, mmCIF) and metadata.
- Analyze Structures: Parse and extract information from downloaded structure files.
- Use Case: A researcher needs to find all human protein structures with a resolution better than 2.0 Å to study a specific disease pathway.
Quick Start
Use the db-pdb skill to search for human protein structures with a resolution less than 2.0 Angstroms.
Dependency Matrix
Required Modules
rcsb-apirequestsbiopython
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: db-pdb Download link: https://github.com/biomaps-infra/blender-opencode/archive/main.zip#db-pdb Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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