db-metabolomics-workbench

Official

Access NIH Metabolomics Workbench

Authorbiomaps-infra
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill provides programmatic access to the NIH Metabolomics Workbench, enabling users to query vast amounts of metabolomics data, standardize metabolite nomenclature, and retrieve experimental details for research and discovery.

Core Features & Use Cases

  • Query Metabolite Data: Access structures, identifiers, and cross-references for over 4,200 studies.
  • Standardize Nomenclature: Use RefMet to ensure consistent metabolite naming.
  • Search MS Data: Perform m/z searches to identify compounds.
  • Retrieve Study Information: Get metadata, experimental factors, and raw data from studies.
  • Use Case: A researcher needs to find all studies related to "diabetes" that measured "glucose" using LC-MS in human plasma. This Skill can retrieve that specific study data.

Quick Start

Use the db-metabolomics-workbench skill to find studies containing the metabolite 'Tyrosine'.

Dependency Matrix

Required Modules

None required

Components

references

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: db-metabolomics-workbench
Download link: https://github.com/biomaps-infra/blender-opencode/archive/main.zip#db-metabolomics-workbench

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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