db-bindingdb
OfficialQuery BindingDB for drug-target affinities.
Data & Analytics#bioinformatics#drug discovery#medicinal chemistry#target identification#affinity#bindingdb
Authorbiomaps-infra
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill provides access to the BindingDB database, enabling users to query measured drug-target binding affinities, which is crucial for drug discovery and research.
Core Features & Use Cases
- Query by Target: Find compounds binding to a specific protein target using its UniProt ID.
- Query by Compound: Search for binding data based on a compound's name or SMILES string.
- Data Download & Analysis: Facilitates downloading and analyzing large datasets for SAR studies and ML model preparation.
- Use Case: A medicinal chemist can use this Skill to quickly find known inhibitors for a newly identified cancer target protein, accelerating lead identification.
Quick Start
Use the db-bindingdb skill to find ligands with a Ki less than 100 nM for the UniProt ID P00519.
Dependency Matrix
Required Modules
requestspandasnumpy
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: db-bindingdb Download link: https://github.com/biomaps-infra/blender-opencode/archive/main.zip#db-bindingdb Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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