data-analysis-hypothesis-generation

Generate competing testable scientific hypotheses with literature grounding and experimental designs.

Updated Jan 28, 2026
One-click install
npx skills add https://github.com/scanady/nexus-skills --skill data-analysis-hypothesis-generation-scanady
Or copy as Structured Prompt for Agent▼
Please help me install this Agent Skill.
Skill: data-analysis-hypothesis-generation
Source: https://github.com/scanady/nexus-skills/tree/main/skills/data-analysis-hypothesis-generation
Command: npx skills add https://github.com/scanady/nexus-skills --skill data-analysis-hypothesis-generation-scanady

SYSTEM DOCUMENTATION & REQUIREMENTS

💡 This Skill includes references (resource) and assets (resource) components.

What problem does it solve? Turning a raw observation or preliminary data into rigorous, testable scientific hypotheses is hard: explanations tend to be vague, unfalsifiable, or cherry-picked. This Skill structures the process of proposing distinct mechanistic explanations, grounding them in the literature, and designing experiments that tell them apart. ## Core Features & Use Cases - Competing Hypothesis Generation: Produces 3-5 genuinely distinct mechanistic hypotheses, each evaluated against testability, falsifiability, parsimony, explanatory power, scope, consistency, and novelty. - Literature Grounding: Applies PubMed and web search strategies (reviews first, then primary research, then citation mining) with source-quality criteria and citation organization. - Experimental Design: Matches designs to claims (RCT, cohort, case-control, in vitro, computational) with controls, blinding, power analysis, and confound mitigation, plus falsifiable and distinguishing predictions. - Structured Reporting: Ships a LaTeX report template with color-coded hypothesis, prediction, and comparison boxes, plus a formatting guide for main text and appendices. - Use Case: Given an unexpected experimental result, generate three competing mechanistic explanations, a discriminating experiment for each pair, and a formatted report with 50+ cited references. ## Quick Start Use the data-analysis-hypothesis-generation skill to propose competing testable hypotheses for this observation and design experiments to distinguish them.

Frequently Asked Questions about data-analysis-hypothesis-generation

High-intent search queries and answers about installing and using this skill.

FAQPage Schema
How do I generate testable hypotheses from an observation?▼

Clarify the phenomenon and its scope, search the literature starting with reviews, then propose 3-5 distinct mechanistic hypotheses. Evaluate each against testability, falsifiability, and parsimony, then design experiments with controls and state falsifiable predictions that distinguish the hypotheses.

What makes a scientific hypothesis falsifiable?▼

A falsifiable hypothesis specifies a concrete observation that would disprove it, such as a knockout eliminating a phenotype. Avoid escape clauses like "may vary with context" and post-hoc explanations that fit any outcome.

How do I design an experiment to distinguish competing hypotheses?▼

Identify predictions that differ between hypotheses, then match the design to the claim: manipulation or RCT for causal claims, cohort or case-control for associations. Include negative and positive controls, blinding, power analysis of at least 80%, and confound mitigation.

Does this skill work for product or UX hypotheses?▼

No, product outcome hypotheses of the form "we believe X will happen if..." belong to the lean-ux skill, and model fitting belongs to statistical-modeling. This skill covers scientific-method hypothesis formulation grounded in literature and experimental design.

Why does the LaTeX hypothesis report fail to compile?▼

The template requires XeLaTeX or LuaLaTeX, not pdfLaTeX, because the colored boxes and fonts depend on it. Keep hypothesis_generation.sty beside the .tex file and run xelatex, bibtex, then xelatex twice more to resolve citations.