coot-figure-making
CommunityPublish publication-ready Coot figures.
Authorpemsley
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill helps scientists produce publication-quality molecular graphics figures in Coot by providing best-practice workflows for color, ribbons, and representations, reducing trial-and-error and ensuring reproducible visuals.
Core Features & Use Cases
- Structured workflows for coloring by secondary structure and custom colors
- Ribbon-based representations with user-defined color schemes for clear figures
- View and styling presets tailored for publication-quality outputs
Quick Start
Use the Coot Figure-Making Best Practices skill to set up a GFP figure:
- Define a color palette for strands, helices, and chromophores using the recommended indices (60, 61, 62).
- Assign colors to secondary structure selections and create a ribbon representation.
- Hide bonds for a clean silhouette, then center the view and adjust the zoom for publication-quality output.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: coot-figure-making Download link: https://github.com/pemsley/coot/archive/main.zip#coot-figure-making Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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