chembl-database

Community

Query ChEMBL bioactivity data.

AuthorRowtion
Version1.0.0
Installs0

System Documentation

What problem does it solve?

This Skill provides programmatic access to the ChEMBL database, enabling researchers to efficiently query bioactive molecules, drug targets, and bioactivity data, thereby accelerating drug discovery and medicinal chemistry efforts.

Core Features & Use Cases

  • Compound & Target Search: Find molecules by name, structure, or properties; retrieve detailed information about biological targets.
  • Bioactivity Data Retrieval: Query IC50, Ki, EC50 values and other activity measurements for specific compounds or targets.
  • Structure-Based Queries: Perform similarity and substructure searches to identify related compounds.
  • Drug Information: Access data on approved drugs, their mechanisms of action, and indications.
  • Use Case: A medicinal chemist can use this Skill to find all known inhibitors of a specific kinase target with an IC50 below a certain threshold, and then analyze their chemical structures for structure-activity relationships.

Quick Start

Use the chembl-database skill to find all compounds with an IC50 less than 100 nM for the target CHEMBL203.

Dependency Matrix

Required Modules

chembl_webresource_clientpandas

Components

scriptsreferences

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: chembl-database
Download link: https://github.com/Rowtion/Bioclaw/archive/main.zip#chembl-database

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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