brenda-database
OfficialAccess BRENDA enzyme data for kinetics and reactions.
AuthorK-Dense-AI
Version1.0.0
Installs0
System Documentation
What problem does it solve?
This Skill interfaces with the BRENDA enzyme database to retrieve Km/KmValue data, reaction equations, enzyme discovery details, and organism-specific enzyme information for biochemical research and pathway analysis.
Core Features & Use Cases
- Kinetic parameter retrieval: Get Km values across organisms and substrates.
- Reaction information: Retrieve reaction equations and stoichiometry.
- Enzyme discovery: Find enzymes by substrate or product; search by pattern.
- Cross-organism comparisons: Compare enzyme properties across organisms.
- Environmental and substrate specificity data: Environmental conditions and substrate interactions.
Quick Start
- Ensure BRENDA SOAP access credentials are configured.
- Use scripts/brenda_queries.py to search Km values for EC 1.1.1.1 across organisms.
Dependency Matrix
Required Modules
zeeprequestspandas
Components
scriptsreferences
💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: brenda-database Download link: https://github.com/K-Dense-AI/claude-scientific-skills/archive/main.zip#brenda-database Please download this .zip file, extract it, and install it in the .claude/skills/ directory.