bio-phylogenomics

Community

Automate marker gene alignments and phylogenies.

Authorfmschulz
Version1.0.0
Installs0

System Documentation

What problem does it solve?

Marker gene phylogenomics workflows are laborious and prone to inconsistency; this skill provides a reproducible framework to extract marker genes, align them, and infer robust phylogenetic trees.

Core Features & Use Cases

  • Marker gene extraction, alignment, and trimming following project-standard workflows.
  • Phylogenetic tree inference using validated methods with bootstrap support and post-processing.
  • Use Case: Build cross-taxon phylogenies from marker genes to infer species relationships.

Quick Start

Provide your marker gene set and run the workflow to produce alignments and phylogenetic trees.

Dependency Matrix

Required Modules

None required

Components

Standard package

💻 Claude Code Installation

Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.

Please help me install this Skill:
Name: bio-phylogenomics
Download link: https://github.com/fmschulz/omics-skills/archive/main.zip#bio-phylogenomics

Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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