bio-assembly-qc
CommunityAutomate genome/metagenome assembly QC.
Authorfmschulz
Version1.0.0
Installs0
System Documentation
What problem does it solve?
Assemble genomes/metagenomes and produce assembly QC artifacts.
Core Features & Use Cases
- Select the appropriate assembler based on read type (e.g., SPAdes for short reads, Flye for long reads) and genome size.
- Run assembly with resource-aware settings and monitor for quality gates.
- Run QUAST/MetaQUAST and summarize metrics to produce QC reports.
Quick Start
Run an appropriate assembler for your read type (SPAdes for short reads, Flye for long reads), then execute QUAST/MetaQUAST to produce QC reports.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: bio-assembly-qc Download link: https://github.com/fmschulz/omics-skills/archive/main.zip#bio-assembly-qc Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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